ON/OFF=ON
plink_path=plink
vcftools_path=vcftools
bgzip_path=bgzip
tabix_path=tabix
python_path=python3
sweepfinder_path=SweepFinder2
ref_fa=/RUN_DOCKER/data/ref/cow.chr1.fa
autosome_num=1
grid_size=1000
threads=20
vcf=./out/02_VariantCalling/VariantCalling/FINAL/ALL.variant.combined.GT.SNP.flt.vcf.gz
plink=./out/03_Postprocessing/plink/ALL